Mappings for the fujitsu-observation-microsatellite-instability resource profile.
| FujitsuObservationMicrosatelliteInstability |
| Observation | < 363787002 |Observable entity| |
| status | < 445584004 |Report by finality status| |
| code | < 363787002 |Observable entity| OR < 386053000 |Evaluation procedure| |
| value[x] | < 441742003 |Evaluation finding| |
| value[x] (valueCodeableConcept) | < 441742003 |Evaluation finding| |
| specimen | < 123038009 |Specimen| |
| component | |
| code | < 363787002 |Observable entity| OR
< 386053000 |Evaluation procedure| |
| value[x] | 363714003 |Interprets| < 441742003 |Evaluation finding| |
| interpretation | < 260245000 |Findings values| |
| FujitsuObservationMicrosatelliteInstability |
| Observation | OBX |
| identifier | OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4. |
| status | OBX-11 |
| category | |
| category (labCategory) | |
| coding | C*E.1-8, C*E.10-22 |
| system | C*E.3 |
| code | C*E.1 |
| display | C*E.2 - but note this is not well followed |
| text | C*E.9. But note many systems use C*E.2 for this |
| code | OBX-3 |
| coding | C*E.1-8, C*E.10-22 |
| system | C*E.3 |
| code | C*E.1 |
| display | C*E.2 - but note this is not well followed |
| text | C*E.9. But note many systems use C*E.2 for this |
| subject | PID-3 |
| effective[x] | OBX-14, and/or OBX-19 after v2.4 (depends on who observation made) |
| value[x] | OBX.2, OBX.5, OBX.6 |
| value[x] (valueCodeableConcept) | OBX.2, OBX.5, OBX.6 |
| coding | C*E.1-8, C*E.10-22 |
| system | C*E.3 |
| code | C*E.1 |
| display | C*E.2 - but note this is not well followed |
| text | C*E.9. But note many systems use C*E.2 for this |
| dataAbsentReason | N/A |
| specimen | SPM segment |
| component | containment by OBX-4? |
| code | OBX-3 |
| value[x] | OBX.2, OBX.5, OBX.6 |
| dataAbsentReason | N/A |
| interpretation | OBX-8 |
| referenceRange | OBX.7 |
| FujitsuObservationMicrosatelliteInstability |
| Observation | Entity. Role, or Act, Observation[classCode=OBS, moodCode=EVN] |
| text | Act.text? |
| contained | N/A |
| identifier | id |
| status | status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of "revise" |
| category | .outboundRelationship[typeCode="COMP].target[classCode="LIST", moodCode="EVN"].code |
| category (labCategory) | .outboundRelationship[typeCode="COMP].target[classCode="LIST", moodCode="EVN"].code |
| coding | union(., ./translation) |
| system | ./codeSystem |
| code | ./code |
| display | CV.displayName |
| text | ./originalText[mediaType/code="text/plain"]/data |
| code | code |
| coding | union(., ./translation) |
| system | ./codeSystem |
| code | ./code |
| display | CV.displayName |
| text | ./originalText[mediaType/code="text/plain"]/data |
| subject | participation[typeCode=RTGT] |
| reference | N/A |
| identifier | .identifier |
| effective[x] | effectiveTime |
| value[x] | value |
| value[x] (valueCodeableConcept) | value |
| coding | union(., ./translation) |
| system | ./codeSystem |
| code | ./code |
| display | CV.displayName |
| text | ./originalText[mediaType/code="text/plain"]/data |
| dataAbsentReason | value.nullFlavor |
| specimen | participation[typeCode=SPC].specimen |
| reference | N/A |
| identifier | .identifier |
| component | outBoundRelationship[typeCode=COMP] |
| id | n/a |
| extension | n/a |
| modifierExtension | N/A |
| code | code |
| value[x] | value |
| dataAbsentReason | value.nullFlavor |
| interpretation | interpretationCode |
| referenceRange | outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN] |